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Payroll for Churches &
Non-Profit Organizations

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Payroll You Can Trust, So You Can Focus On Your Mission, Not Administration

Expert payroll and HR support for churches, ministries, mission-driven non-profit organizations, delivered by real people who understand compliance, culture, and calling.

Why Churches and Non-Profits Choose Genesis PPG

Churches and non-profit organizations operate differently than traditional businesses. Payroll decisions often involve limited administrative staff, high trust, and serious responsibility, making the right partner essential.

Payroll and Tax Considerations for Churches and Non-Profits

Payroll for churches and non-profit organizations involves rules and classifications that differ from standard business payroll. Understanding these differences is essential for accurate payroll processing and compliance.

 

Genesis PPG supports churches and non-profits by recognizing and accounting for these distinctions throughout the payroll process.

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  • Clergy Housing Allowances (Churches and Ministries)
    Understanding how designated housing allowances are reflected in payroll records and reporting.
     

  • Ministerial vs. Non-Ministerial Employees
    Awareness of dual-status roles and how employee classification affects payroll treatment.
     

  • FICA Exemptions and SECA Obligations
    Recognizing when ministers are exempt from FICA and subject to self-employment tax requirements.
     

  • Stipends, Reimbursements, and Wages
    Proper handling of different forms of compensation common in churches and non-profits.
     

  • Volunteers vs. Employees
    Navigating payroll implications when volunteers receive compensation or stipends.
     

  • 501(c)(3) Payroll Tax Reporting
    Supporting payroll tax filings aligned with non-profit and church requirements.

Payroll, Tax, and HR Services for Churches and Non-Profits

HR and Compliance Support
  • Employee setup and onboarding support

  • Classification and documentation assistance

  • Compliance reporting tools

  • Ongoing support as your organization grows

Payroll and Tax Services
  • Full-service payroll processing

  • Direct deposit and check processing

  • Payroll tax filing and reporting

  • Year-end forms, including W-2s and 1099s

All services are supported by secure, modern technology, and experienced payroll professionals who are available when questions arise.

Our 10% Give-Back Commitment

Genesis PPG believes payroll partnerships should reflect shared values, not just transactions.
 

For every new church, ministry, or not-for-profit organization that partners with Genesis PPG for payroll services, Genesis will donate 10% of its payroll billing.

 

This contribution will support the following organizations that Genesis actively champions both within our community and globally:

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Young Life serves middle school, high school, and college students by building relationships with young people and introducing them to faith through mentorship, community, and consistent presence.

 

Ugandan Water Project is a non-profit organization that implements and advocates for clean water solutions in communities across Uganda.

Through Genesis PPG’s give-back model, non-profits extend their impact beyond their own walls.

Uganda Water Project

"Our payroll runs smoothly thanks to Genesis.  My payroll specialist is always available to help with any payroll questions or assistance I need.  I am immensely grateful for how responsive your team has been.  Thank you!"

Request More Information

You don’t need the biggest payroll provider.
You need one that understands your organization.
 

Click below to request more information from Genesis PPG to learn how we support churches and non-profits with payroll expertise, personal service, and purpose-driven impact.

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Genesis PPG

Suite 17

10225 Main St.

Clarence, NY 14031

​

716.407.3213

info@genesisppg.com

​Discover how the Genesis PPG team can help your business save and simplify.

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